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Germany

List of diseases:

Ascomycota (other orders)
Ascomycota - Dothideomycetes
Ascomycota - Leotiomycetes
Ascomycota - Sordariomycetes
Bacteria
Basidiomycota
Other fungal-like organisms
Other plant diseases
Plant parasitic nematodes
Plant viruses

(Detailed information on all pests, diseases and weeds can be found in the downloadable Excel files)
click on a pest/disease/weed to display a list of relevant publications

Ascomycota (other orders):

Apinisia graminicola
Aspergillus candidus
Aspergillus niger
Cadophora luteo-olivacea
Cryptostroma corticale
Cyphellophora aestiva
Microcyclosporella mali
Mycocentrospora acerina
Peltaster cerophilus
Penicillium expansum
Phaeomoniella chlamydospora
Phialocephala (anamorphic genus)

Ascomycota - Dothideomycetes:

Allophoma tropica
Alternaria alternata
Alternaria brassicae
Alternaria brassicicola
Alternaria dauci
Alternaria infectoria
Alternaria radicina
Alternaria solani
Ascochyta fabae
Ascochyta pisi
Bipolaris sorokiniana
Boeremia exigua
Boeremia exigua var. populi
Botryosphaeria dothidea
Cercospora apii
Cercospora beticola
Cladosporium cladosporioides
Cladosporium cucumerinum
Cladosporium herbarum
Cladosporium iridis
Cladosporium sphaerospermum
Cladosporium variabile
Coniothyrium hellebori
Cymadothea trifolii
Didymella glomerata
Didymella macrostoma
Didymella pinodella
Didymella pinodes
Diplodia bulgarica
Diplodia malorum
Diplodia sapinea
Dothiorella sarmentorum
Dothistroma septosporum
Elsinoë murrayae
Exserohilum turcicum
Graphiopsis chlorocephala
Lecanosticta acicola
Macrodiplodiopsis desmazieri
Neopseudocercosporella brassicae
Nothophaeocryptopus gaeumannii
Parastagonospora avenae
Parastagonospora nodorum
Phyllosticta ampelicida
Phyllosticta sphaeropsoidea
Plenodomus lingam
Pseudocercospora griseola
Pseudodidymella fagi
Pseudopyrenochaeta lycopersici
Pyrenophora graminea
Pyrenophora teres
Pyrenophora tritici-repentis
Ramularia collo-cygni
Rhizosphaera kalkhoffii
Schizothyrium pomi
Septoria birgitae
Septoria lactucae
Sphaerulina frondicola
Stagonosporopsis chrysanthemi
Stagonosporopsis tanaceti
Stagonosporopsis valerianellae
Stemphylium botryosum
Stemphylium vesicarium
Venturia cerasi
Venturia inaequalis
Zymoseptoria tritici

Ascomycota - Leotiomycetes:

Allantophomopsiella pseudotsugae
Blumeria graminis
Blumeriella jaapii
Botrytis (anamorphic genus)
Botrytis cinerea
Botrytis fragariae
Botrytis pseudocinerea
Didymascella thujina
Diplocarpon coronariae
Diplocarpon rosae
Erysiphe alphitoides
Erysiphe betae
Erysiphe catalpae
Erysiphe flexuosa
Erysiphe hypophylla
Erysiphe lonicerae
Erysiphe magnifica
Erysiphe necator
Erysiphe polygoni
Erysiphe quercicola
Golovinomyces biocellatus
Golovinomyces cichoracearum
Golovinomyces longipes
Golovinomyces orontii
Helgardiomyces anguioides
Hymenobolus agaves
Hymenoscyphus fraxineus
Lophodermium cedrinum
Monilinia fructicola
Monilinia fructigena
Monilinia laxa
Neoerysiphe galeopsidis
Neofabraea malicorticis
Neofabraea perennans
Oculimacula acuformis
Oculimacula yallundae
Phacidiopycnis washingtonensis
Phlyctema vagabunda
Podosphaera clandestina
Podosphaera leucotricha
Podosphaera macularis
Podosphaera pannosa
Podosphaera tridactyla
Podosphaera xanthii
Pseudoidium neolycopersici
Rhabdocline pseudotsugae
Rhynchosporium commune
Rhynchosporium secalis
Rhytisma acerinum
Roesleria subterranea
Sclerotinia sclerotiorum

Ascomycota - Sordariomycetes:

Acremonium alternatum
Apiognomonia erythrostoma
Apiognomonia veneta
Berkeleyomyces basicola
Calonectria colhounii
Calonectria henricotiae
Calonectria pseudonaviculata
Chondroplea populea
Claviceps purpurea
Coccinonectria pachysandricola
Colletotrichum acutatum
Colletotrichum cereale
Colletotrichum coccodes
Colletotrichum fructicola
Colletotrichum fuscum
Colletotrichum gloeosporioides
Colletotrichum lindemuthianum
Colletotrichum lini
Colletotrichum lupini
Colletotrichum orbiculare
Colletotrichum orchidearum
Colletotrichum sansevieriae
Colletotrichum spaethianum
Colletotrichum trifolii
Corinectria fuckeliana
Cosmospora coccinea
Cryphonectria parasitica
Cylindrocladiella parva
Dactylonectria torresensis
Daldinia loculata
Diaporthe ampelina
Diaporthe eres
Diaporthe helianthi
Diploceras hypericinum
Discula destructiva
Eutypa lata
Eutypella parasitica
Fusarium (genus)
Fusarium acuminatum
Fusarium avenaceum
Fusarium caeruleum
Fusarium callistephi
Fusarium cugenangense
Fusarium culmorum
Fusarium curvatum
Fusarium equiseti
Fusarium flocciferum
Fusarium foetens
Fusarium graminearum
Fusarium oxysporum
Fusarium oxysporum f.sp. asparagi
Fusarium oxysporum f.sp. cepae
Fusarium oxysporum f.sp. pisi
Fusarium poae
Fusarium proliferatum
Fusarium redolens
Fusarium sacchari
Fusarium sambucinum
Fusarium sporotrichioides
Fusarium subglutinans
Fusarium succisae
Fusarium tricinctum
Fusarium venenatum
Fusarium verticillioides
Gaeumannomyces graminis
Gaeumannomyces tritici
Gibellulopsis nigrescens
Gliomastix cerealis
Hypoxylon cohaerens
Ilyonectria crassa
Ilyonectria destructans
Microdochium majus
Microdochium nivale
Nectria cinnabarina
Neocosmospora pisi
Neocosmospora solani
Neonectria coccinea
Neonectria ditissima
Neonectria obtusispora
Ophiostoma neglectum
Ophiostoma novo-ulmi
Ophiostoma piceae
Phaeoacremonium minimum
Phaeoacremonium viticola
Rectifusarium ventricosum
Sirococcus tsugae
Trichoderma pleuroticola
Trichothecium roseum
Truncatella angustata
Verticillium alboatrum
Verticillium alfalfae
Verticillium dahliae
Verticillium longisporum

Bacteria:

Acidovorax avenae
Agrobacterium tumefaciens
Allorhizobium vitis
Clavibacter michiganensis
Clavibacter sepedonicus
Curtobacterium flaccumfaciens
Dickeya (genus)
Dickeya dadantii subsp. dieffenbachiae
Erwinia amylovora
Erwinia persicina
Liberibacter solanacearum
Pectobacterium atrosepticum
Pectobacterium carotovorum
Pseudomonas cannabina
Pseudomonas cichorii
Pseudomonas corrugata
Pseudomonas lurida
Pseudomonas marginalis
Pseudomonas syringae
Pseudomonas syringae pv. aesculi
Pseudomonas syringae pv. aptata
Pseudomonas syringae pv. atrofaciens
Pseudomonas syringae pv. coriandricola
Pseudomonas syringae pv. delphinii
Pseudomonas syringae pv. glycinea
Pseudomonas syringae pv. helianthi
Pseudomonas syringae pv. lachrymans
Pseudomonas syringae pv. morsprunorum
Pseudomonas syringae pv. papulans
Pseudomonas syringae pv. syringae
Pseudomonas syringae pv. tomato
Pseudomonas viridiflava
Ralstonia solanacearum
Rhizobium rubi
Streptomyces acidiscabies
Streptomyces bottropensis
Streptomyces europaeiscabiei
Streptomyces scabiei
Streptomyces stelliscabiei
Streptomyces turgidiscabies
Xanthomonas arboricola pv. juglandis
Xanthomonas axonopodis pv. begoniae
Xanthomonas campestris pv. campestris
Xanthomonas campestris pv. raphani
Xanthomonas campestris pv. vesicatoria
Xanthomonas campestris pv. vitians
Xanthomonas euvesicatoria
Xanthomonas fragariae
Xanthomonas hortorum pv. pelargonii
Xanthomonas phaseoli pv. dieffenbachiae
Xanthomonas translucens

Basidiomycota:

Armillaria gallica
Armillaria mellea
Armillaria ostoyae
Ceratobasidium cereale
Coleosporium tussilaginis
Cronartium ribicola
Entyloma cosmi
Flammulina velutipes
Fomitiporia mediterranea
Fomitiporia punctata
Gymnosporangium clavariiforme
Heterobasidion annosum
Heterobasidion parviporum
Melampsora allii-fragilis
Melampsora allii-populina
Melampsorella caryophyllacearum
Microbotryum violaceum
Mycosarcoma maydis
Phellinus igniarius
Pleurotus ostreatus
Puccinia allii
Puccinia buxi
Puccinia coronata
Puccinia graminis
Puccinia hordei
Puccinia recondita
Puccinia sorghi
Puccinia striiformis
Puccinia triticina
Pucciniastrum minimum
Rhizoctonia AG-E
Rhizoctonia solani
Tilletia caries
Tilletia controversa
Tilletia laevis
Urocystis occulta
Uromyces appendiculatus
Ustacystis waldsteiniae
Ustilago tritici

Other fungal-like organisms:

Albugo candida
Aphanomyces cochlioides
Bremia lactucae
Elongisporangium undulatum
Globisporangium intermedium
Globisporangium irregulare
Globisporangium sylvaticum
Globisporangium ultimum
Hyaloperonospora parasitica
Perofascia lepidii
Peronospora aquilegiicola
Peronospora destructor
Peronospora farinosa
Peronospora salviae-officinalis
Peronospora tabacina
Peronospora valerianellae
Peronospora viciae
Phytophthora (genus)
Phytophthora ×multiformis
Phytophthora alni
Phytophthora austrocedri
Phytophthora cactorum
Phytophthora cambivora
Phytophthora cinnamomi
Phytophthora citricola
Phytophthora citrophthora
Phytophthora cryptogea
Phytophthora drechsleri
Phytophthora europaea
Phytophthora fragariae
Phytophthora gemini
Phytophthora gonapodyides
Phytophthora infestans
Phytophthora nicotianae
Phytophthora obscura
Phytophthora palmivora
Phytophthora plurivora
Phytophthora pseudosyringae
Phytophthora quercina
Phytophthora ramorum
Phytophthora syringae
Phytophthora tentaculata
Phytophthora tropicalis
Phytophthora uliginosa
Phytophthora uniformis
Plasmodiophora brassicae
Plasmopara halstedii
Plasmopara muralis
Plasmopara obducens
Plasmopara pusilla
Plasmopara viticola
Plasmopara wilsonii
Polymyxa betae
Polymyxa graminis
Pseudoperonospora cubensis
Pseudoperonospora humuli
Pustula helianthicola
Pythium aphanidermatum
Pythium arrhenomanes
Pythium catenulatum
Pythium inflatum
Pythium mastophorum
Pythium myriotylum
Pythium recalcitrans
Rhizopus arrhizus
Sclerophthora macrospora
Sorosphaera viticola
Spongospora subterranea
Synchytrium endobioticum

Other plant diseases:

16SrI phytoplasma group
16SrV phytoplasma group
16SrX phytoplasma group
16SrXII phytoplasma group
Alder yellows phytoplasma
Citrus exocortis viroid
Coleus blumei viroids
Grapevine yellow speckle viroid 1
Grapevine yellows phytoplasma
Hop stunt viroid
Phytoplasma asteris
Phytoplasma mali
Phytoplasma pini
Phytoplasma pruni
Phytoplasma prunorum
Phytoplasma pyri
Phytoplasma rubi
Phytoplasma solani
Phytoplasma ulmi
Phytoplasma vitis
Potato spindle tuber viroid
Tomato apical stunt viroid
Vergilbungskrankheit phytoplasma of grapevine

Plant parasitic nematodes:

Aphelenchoides stammeri
Bursaphelenchus (genus)
Bursaphelenchus eggersi
Bursaphelenchus eremus
Bursaphelenchus fraudulentus
Bursaphelenchus fungivorus
Bursaphelenchus hofmanni
Bursaphelenchus leoni
Bursaphelenchus mucronatus
Bursaphelenchus polygraphi
Bursaphelenchus rainulfi
Bursaphelenchus sexdentati
Bursaphelenchus vallesianus
Ditylenchus dipsaci
Globodera (genus)
Globodera pallida
Globodera rostochiensis
Helicotylenchus pseudorobustus
Heterodera (genus)
Heterodera avenae
Heterodera betae
Heterodera filipjevi
Heterodera humuli
Heterodera pratensis
Heterodera schachtii
Longidorus attenuatus
Longidorus elongatus
Longidorus macrosoma
Longidorus poessneckensis
Longidorus profundorum
Longidorus sturhani
Meloidogyne (genus)
Meloidogyne arenaria
Meloidogyne chitwoodi
Meloidogyne enterolobii
Meloidogyne hapla
Meloidogyne incognita
Meloidogyne naasi
Mesocriconema hymenophorum
Paralongidorus maximus
Paratylenchus (genus)
Paratylenchus bukowinensis
Pratylenchus (genus)
Pratylenchus crenatus
Pratylenchus neglectus
Pratylenchus penetrans
Rotylenchulus macrosoma
Rotylenchus robustus
Trichodorus (genus)
Tylenchorhynchus (genus)
Xiphinema index
Xiphinema vuittenezi

Plant viruses:

Abutilon mosaic virus
Agropyron mosaic virus
Alfalfa mosaic virus
Angelonia flower mottle virus
Apium virus Y
Apple chlorotic leaf spot virus
Apple mosaic virus
Apple stem grooving virus
Apple stem pitting virus
Arabis mosaic virus
Asparagus virus 1
Asparagus virus 2
Bacopa chlorosis virus
Barley mild mosaic virus
Barley stripe mosaic virus
Barley yellow dwarf virus PAV
Barley yellow dwarf viruses
Barley yellow mosaic virus
Barley yellow striate mosaic virus
Bean leafroll virus
Bean yellow mosaic virus
Beet chlorosis virus
Beet mild yellowing virus
Beet mosaic virus
Beet necrotic yellow vein virus
Beet soil-borne mosaic virus
Beet soil-borne virus
Beet virus Q
Beet yellows virus
Broad bean wilt virus 1
Broad bean wilt virus 2
Brome mosaic virus
Brome streak mosaic virus
Carrot thin leaf virus
Carrot yellow leaf virus
Celery mosaic virus
Cereal yellow dwarf virus RPV
Cherry leaf roll virus
Cherry necrotic rusty mottle virus
Cherry virus A
Cocksfoot mottle virus
Cocksfoot streak virus
Colombian datura virus
Common oak ringspot-associated emaravirus
Cucumber leaf spot virus
Cucumber mosaic virus
Cymbidium mosaic virus
European mountain ash ringspot-associated virus
European wheat striate mosaic virus
Festuca leaf streak virus
Furovirus (genus)
Garlic common latent virus
Grapevine fanleaf virus
Grapevine leafroll-associated virus 1
Grapevine Pinot gris virus
Grapevine red globe virus
Grapevine rupestris vein feathering virus
Grapevine virus A
Grapevine virus T
Iris yellow spot virus
Leek yellow stripe virus
Little cherry virus 1
Little cherry virus 2
Lolium latent virus
Maize dwarf mosaic virus
Maize rough dwarf virus
Malva vein clearing virus
Mirafiori lettuce big-vein virus
Molinia streak virus
Nanovirus (genus)
Nemesia ring necrosis virus
Oat necrotic mottle virus
Oat sterile dwarf virus
Odontoglossum ringspot virus
Orchid fleck dichorhavirus
Parsley severe stunt associated virus
Passiflora latent virus
Pea enation mosaic virus-1
Pea necrotic yellow dwarf virus
Pepino mosaic virus
Petunia asteroid mosaic virus
Petunia vein clearing virus
Physostegia chlorotic mottle alphanucleorhabdovirus
Plum pox virus
Potato leafroll virus
Potato virus A
Potato virus M
Potato virus S
Potato virus X
Potato virus Y
Prune dwarf virus
Raspberry ringspot virus
Ribgrass mosaic virus
Ryegrass mosaic virus
Ryegrass mottle virus
Soil-borne cereal mosaic virus
Soil-borne wheat mosaic virus
Soybean dwarf virus
Spartina mottle virus
Statice decline virus
Strawberry latent ringspot virus
Strawberry mild yellow edge virus
Strawberry mottle virus
Strawberry vein banding virus
Sugarcane mosaic virus
Tobacco mosaic virus
Tobacco rattle virus
Tomato aspermy virus
Tomato black ring virus
Tomato brown rugose fruit virus
Tomato bushy stunt virus
Tomato mosaic virus
Tomato ringspot virus
Turnip mosaic virus
Turnip yellows virus
Wheat dwarf virus
Wheat soil-borne mosaic virus
Wheat spindle streak mosaic virus
Wheat streak mosaic virus
Zucchini yellow mosaic virus