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France

List of diseases:

Ascomycota (other orders)
Ascomycota - Dothideomycetes
Ascomycota - Leotiomycetes
Ascomycota - Sordariomycetes
Bacteria
Basidiomycota
Other fungal-like organisms
Other plant diseases
Plant parasitic nematodes
Plant viruses

(Detailed information on all pests, diseases and weeds can be found in the downloadable Excel files)
click on a pest/disease/weed to display a list of relevant publications

Ascomycota (other orders):

Aspergillus candidus
Aspergillus fumigatus
Cadophora luteo-olivacea
Cryptostroma corticale
Mycocentrospora acerina
Penicillium chrysogenum
Penicillium digitatum
Penicillium expansum
Penicillium solitum
Penicillium verrucosum
Phaeomoniella chlamydospora

Ascomycota - Dothideomycetes:

Alternaria alternata
Alternaria arborescens
Alternaria dauci
Alternaria dichondrae
Alternaria porri
Alternaria tenuissima
Ascochyta medicaginicola
Ascochyta rabiei
Boeremia exigua var. heteromorpha
Boeremia foveata
Botryosphaeria dothidea
Cercospora beticola
Cercospora medicaginis
Cladosporium cladosporioides
Cladosporium herbarum
Cladosporium iridis
Cladosporium variabile
Didymella pinodella
Didymella pinodes
Diplodia mutila
Diplodia sapinea
Diplodia seriata
Dothistroma pini
Dothistroma septosporum
Elsinoë coryli
Epicoccum sorghinum
Exserohilum turcicum
Graphiopsis chlorocephala
Lasiodiplodia viticola
Lecanosticta acicola
Leptosphaeria pratensis/Stagonospora meliloti
Leptosphaerulina trifolii
Neofusicoccum parvum
Neopseudocercosporella brassicae
Neopseudocercosporella capsellae
Parastagonospora nodorum
Phyllosticta ampelicida
Plenodomus biglobosus
Plenodomus lindquistii
Plenodomus lingam
Pseudocercospora odontoglossi
Pyrenophora graminea
Pyrenophora teres
Ruptoseptoria unedonis
Septoria linicola
Stemphylium vesicarium
Venturia asperata
Venturia inaequalis
Venturia oleaginea
Zymoseptoria tritici

Ascomycota - Leotiomycetes:

Blumeria graminis
Botrytis cinerea
Botrytis pseudocinerea
Botrytis transposa
Botrytis vacuma
Didymascella thujina
Erysiphe alphitoides
Erysiphe betae
Erysiphe lonicerae
Erysiphe necator
Erysiphe quercicola
Golovinomyces cichoracearum
Golovinomyces orontii
Hymenoscyphus albidus
Hymenoscyphus fraxineus
Lachnellula willkommii
Leptotrochila medicaginis
Lophodermium pinastri
Monilinia fructicola
Monilinia fructigena
Monilinia laxa
Neoerysiphe galeopsidis
Oculimacula acuformis
Oculimacula yallundae
Pilidium lythri
Podosphaera aphanis
Podosphaera leucotricha
Podosphaera macularis
Podosphaera pannosa
Podosphaera xanthii
Pseudopeziza medicaginis
Rhynchosporium commune
Rhynchosporium secalis
Sclerotinia sclerotiorum
Sclerotinia trifoliorum

Ascomycota - Sordariomycetes:

Calonectria hederae
Calonectria pseudonaviculata
Ceratocystis fimbriata
Ceratocystis platani
Colletotrichum (anamorphic genus)
Colletotrichum acutatum
Colletotrichum coccodes
Colletotrichum fioriniae
Colletotrichum fructicola
Colletotrichum lindemuthianum
Colletotrichum lupini
Cryphonectria parasitica
Dactylonectria macrodidyma
Dactylonectria pauciseptata
Dactylonectria torresensis
Diaporthe ampelina
Diaporthe amygdali
Diaporthe angelicae
Diaporthe eres
Diaporthe helianthi
Diaporthe novem
Diaporthe oncostoma
Diaporthe rudis
Diaporthe sclerotioides
Diploceras hypericinum
Epichloë (genus)
Epichloë typhina
Eutypa lata
Fusarium (genus)
Fusarium acuminatum
Fusarium avenaceum
Fusarium circinatum
Fusarium cortaderiae
Fusarium crown and root rot
Fusarium culmorum
Fusarium curvatum
Fusarium equiseti
Fusarium foetens
Fusarium glycines
Fusarium graminearum
Fusarium heterosporum
Fusarium incarnatum
Fusarium languescens
Fusarium oxysporum
Fusarium oxysporum f.sp. asparagi
Fusarium oxysporum f.sp. canariensis
Fusarium oxysporum f.sp. cyclaminis
Fusarium oxysporum f.sp. lactucae
Fusarium oxysporum f.sp. melonis
Fusarium poae
Fusarium proliferatum
Fusarium reticulatum
Fusarium sambucinum
Fusarium sporotrichioides
Fusarium subglutinans
Fusarium temperatum
Fusarium tricinctum
Fusarium verticillioides
Gaeumannomyces graminis
Gaeumannomyces tritici
Gibellulopsis nigrescens
Gliomastix cerealis
Gnomoniopsis smithogilvyi
Grosmannia alacris
Grosmannia piceiperda
Ilyonectria destructans
Ilyonectria liriodendri
Leptographium wingfieldii
Microdochium majus
Microdochium nivale
Nectria cinnabarina
Neonectria major
Neonectria neomacrospora
Neopestalotiopsis asiatica
Nigrospora oryzae
Ophiostoma bicolor
Ophiostoma ips
Ophiostoma quercus
Ophiostoma tetropii
Paragnomonia fragariae
Pestalotiopsis biciliata
Phaeoacremonium angustius
Phaeoacremonium minimum
Phaeoacremonium rubrigenum
Phaeoacremonium scolyti
Phaeoacremonium viticola
Pyricularia oryzae
Rosellinia aquila
Trichoderma aggressivum
Truncatella angustata
Verticillium alboatrum
Verticillium alfalfae
Verticillium dahliae

Bacteria:

Acidovorax valerianellae
Agrobacterium tumefaciens
Allorhizobium vitis
Arsenophonus phytopathogenicus
Brenneria nigrifluens
Dickeya (genus)
Dickeya dadantii
Dickeya dianthicola
Dickeya solani
Erwinia amylovora
Liberibacter solanacearum
Pectobacterium brasiliense
Pectobacterium carotovorum
Phlomobacter fragariae
Pseudomonas coronafaciens
Pseudomonas fluorescens
Pseudomonas marginalis
Pseudomonas mediterranea
Pseudomonas salomonii
Pseudomonas savastanoi
Pseudomonas syringae
Pseudomonas syringae pv. actinidiae
Pseudomonas syringae pv. actinidifoliorum
Pseudomonas syringae pv. aptata
Pseudomonas syringae pv. avii
Pseudomonas syringae pv. glycinea
Pseudomonas syringae pv. helianthi
Pseudomonas syringae pv. morihuszi
Pseudomonas syringae pv. morsprunorum
Pseudomonas syringae pv. papulans
Pseudomonas syringae pv. persicae
Pseudomonas syringae pv. phaseolicola
Pseudomonas syringae pv. pisi
Pseudomonas syringae pv. porri
Pseudomonas syringae pv. syringae
Pseudomonas syringae pv. tomato
Pseudomonas viridiflava
Ralstonia solanacearum
Streptomyces europaeiscabiei
Streptomyces reticuliscabiei
Streptomyces scabiei
Streptomyces stelliscabiei
Xanthomonas arboricola pv. corylina
Xanthomonas arboricola pv. juglandis
Xanthomonas arboricola pv. pruni
Xanthomonas campestris pv. campestris
Xanthomonas campestris pv. vitians
Xanthomonas cynarae
Xanthomonas hortorum pv. pelargonii
Xanthomonas populi
Xanthomonas translucens
Xylella fastidiosa
Xylophilus ampelinus

Basidiomycota:

Armillaria ostoyae
Cronartium flaccidum
Cronartium ribicola
Fomitiporia mediterranea
Fomitiporia punctata
Gymnopus fusipes
Heterobasidion abietinum
Heterobasidion annosum
Melampsora allii-populina
Melampsora larici-populina
Melampsora larici-tremulae
Melampsora medusae
Melampsora populnea
Microbotryum violaceum
Puccinia sorghi
Puccinia striiformis
Puccinia triticina
Rhizoctonia AG-E
Rhizoctonia AG-K
Rhizoctonia solani
Sporisorium reilianum
Stereum hirsutum
Uromyces striatus
Uromyces viciae-fabae

Other fungal-like organisms:

Albugo candida
Aphanomyces euteiches
Bremia lactucae
Globisporangium intermedium
Globisporangium spiculum
Hyaloperonospora parasitica
Olpidium bornovanus
Peronospora (genus)
Peronospora arborescens
Peronospora tabacina
Phytophthora ×multiformis
Phytophthora alni
Phytophthora cactorum
Phytophthora cambivora
Phytophthora capsici
Phytophthora cinnamomi
Phytophthora citricola
Phytophthora citrophthora
Phytophthora cryptogea
Phytophthora erythroseptica
Phytophthora europaea
Phytophthora fragariae
Phytophthora gallica
Phytophthora gonapodyides
Phytophthora ilicis
Phytophthora infestans
Phytophthora inundata
Phytophthora lateralis
Phytophthora megasperma
Phytophthora nicotianae
Phytophthora niederhauserii
Phytophthora palmivora
Phytophthora parasitica
Phytophthora pseudosyringae
Phytophthora quercina
Phytophthora ramorum
Phytophthora rubi
Phytophthora syringae
Phytophthora uniformis
Plasmodiophora brassicae
Plasmopara halstedii
Plasmopara viticola
Polymyxa graminis
Pseudoperonospora cubensis
Pseudoperonospora humuli
Pythium (genus)
Pythium aphanidermatum
Pythium echinogynum
Pythium sterilum
Spongospora subterranea

Other plant diseases:

16SrI phytoplasma group
16SrV phytoplasma group
16SrXII phytoplasma group
Chrysanthemum stunt viroid
Columnea latent viroid
Grapevine yellow speckle viroid 1
Hop stunt viroid
Pear blister canker viroid
Phytoplasma mali
Phytoplasma prunorum
Phytoplasma solani
Phytoplasma ulmi
Phytoplasma vitis
Potato spindle tuber viroid
Tomato chlorotic dwarf viroid

Plant parasitic nematodes:

Bursaphelenchus mucronatus
Ditylenchus dipsaci
Globodera pallida
Globodera rostochiensis
Globodera tabacum
Heterodera avenae
Heterodera carotae
Heterodera schachtii
Longidorus dalmassoi
Meloidogyne (genus)
Meloidogyne arenaria
Meloidogyne artiellia
Meloidogyne chitwoodi
Meloidogyne enterolobii
Meloidogyne fallax
Meloidogyne incognita
Meloidogyne javanica
Meloidogyne naasi
Pratylenchus fallax
Pratylenchus penetrans
Rotylenchulus macrosoma
Xiphinema diversicaudatum
Xiphinema index

Plant viruses:

Abutilon mosaic virus
Alfalfa leaf curl virus
Alfalfa mosaic virus
Apricot latent ringspot virus
Apricot latent virus
Arabis mosaic virus
Aubian wheat mosaic virus
Barley mild mosaic virus
Barley virus G
Barley yellow dwarf virus MAV
Barley yellow dwarf virus PAS
Barley yellow dwarf virus PAV
Barley yellow dwarf viruses
Barley yellow mosaic virus
Barley yellow mosaic virus 2
Bean leafroll virus
Beet chlorosis virus
Beet mild yellowing virus
Beet mosaic virus
Beet necrotic yellow vein virus
Beet soil-borne virus
Beet virus Q
Beet western yellows virus
Beet yellows virus
Brome streak mosaic virus
Canna yellow streak virus
Carrot mottle virus
Carrot red leaf virus
Carrot torradovirus 1
Cereal yellow dwarf virus RPV
Cherry green ring mottle virus
Cherry leaf roll virus
Cherry virus A
Chestnut mosaic virus
Citrus leaf blotch virus
Citrus tristeza virus
Corn salad necrosis virus
Cucumber mosaic virus
Cucumber vein yellowing virus
Cucurbit aphid-borne yellows virus
Cucurbit yellow stunting disorder virus
Endive necrotic mosaic virus
Grapevine asteroid mosaic-associated virus
Grapevine fanleaf virus
Grapevine Kizil Sapak virus
Grapevine leafroll-associated virus 1
Grapevine leafroll-associated virus 2
Grapevine leafroll-associated virus 3
Grapevine Pinot gris virus
Grapevine red blotch virus
Grapevine red globe virus
Grapevine rupestris stem pitting-associated virus
Grapevine Syrah virus-1
Grapevine virus A
Grapevine virus B
Grapevine virus L
Hordeum vulgare endornavirus
Leek white stripe virus
Leek yellow stripe virus
Lettuce big-vein associated virus
Lettuce Italian necrotic virus
Lettuce mosaic virus
Lettuce necrotic leaf curl virus
Melon chlorotic spot virus
Mirafiori lettuce big-vein virus
Moroccan watermelon mosaic virus
Myrobalan latent ringspot virus
Olive mild mosaic virus
Onion yellow dwarf virus
Orchid fleck dichorhavirus
Parietaria mottle virus
Passiflora chlorosis virus
Pelargonium zonate spot virus
Physostegia chlorotic mottle alphanucleorhabdovirus
Plum pox virus
Potato virus A
Potato virus Y
Prunus necrotic ringspot virus
Soil-borne cereal mosaic virus
Soil-borne wheat mosaic virus
Southern tomato virus
Stocky prune virus
Sugarcane mosaic virus
Tobacco mild green mosaic virus
Tobacco necrosis virus A
Tobacco necrosis virus D
Tobacco rattle virus
Tomato black ring virus
Tomato brown rugose fruit virus
Tomato chlorosis virus
Tomato infectious chlorosis virus
Tomato mosaic virus
Tomato spotted wilt virus
Tomato torrado virus
Turnip mosaic virus
Turnip vein-clearing virus
Watermelon mosaic virus
Wheat dwarf virus
Wheat spindle streak mosaic virus
Wheat streak mosaic virus
Wheat yellow mosaic virus
Zucchini tigre mosaic virus
Zucchini yellow fleck virus
Zucchini yellow mosaic virus